Technically, yes, running the beer through a filter 0.45 micron or smaller will remove the microbes.
Practically? No.
You would need to buy the filter and filtering apparatus, which is more than double the cost of brewing a new batch, AND the beer would likely need to be fined before running it through such a small filter, otherwise it will quickly clog, AND you need a pump to run the beer through it, but not a centrifugal pump like most brewers use, but rather a diaphragm or peristaltic pump because the residual carbonation in beer would be released inside a centrifugal pump rendering it ineffective.
You would also need to add yeast back in if bottle carbonating.