In the Mt Washington Valley i will throw in a vote for Moat Mountain, good food, good beer. If you are heading through the Lincoln NH area i would recommend Woodstock Inn and Brewery. Their beer was up and down a few years ago but they seem to be back on track.
If you are in the Littleton, NH area I recommend Schilling Beer Company
In VT you seem to be hitting many of the top spots. Not sure if i saw Fiddlehead or Lost Nation or Rock Art listed anywhere. All worth visiting. In Waterbury I like the Reservoir(not a brewery but a great VT tap selection and the Blackback Cafe (across the street from Pro Pig, on the corner. not a brewery either but great selection and food