To my mind, no, it's not a clarity issue. My IPA is clear and gorgeous. The problem I had was about 1,000,000 billion pieces of hops litter/leaves that never settled. They floated on the top, middle, and bottom. As I said, I lost about 2 quarts of beer to this- my husband called this "tag alder swamp water". (Apparently, if you're a wildlife biologist, that's funny). It was a thick viscuous fluid that couldn't be racked after a while. To my mind, it would be much easier to keep them in a bag for containment, and then rack off of the trub and bag. I'm definitely going to do that next time. I'll use two or three hop bags (my 1 1/2 ounces of hops in one bag wouldn't fit through the carboy opening and it never even occurred to me to divide it into a couple more bags) and throw them in that way. When I oak wines, that's what I do. I just wasn't thinking about that when I tossed in the hops for the beer.
Lorena