I've been using my mill for about a year now, I had got a CrankandStein 3D so it's a little different from your MM2, but a mill is a mill. Get it adjusted the way you think it should be and run it, watch your efficiency, make good notes and you'll soon get it dialed in and working well.
One thing that seems to have helped my crush is to condition the grain before crushing. I use 1oz water per pound of grain the night before crushing, it seems to work better for me if it sets 8-12 hours from conditioning to crushing. One time I conditioned 10-20 minutes before crushing and had problems with the rollers gumming up, so now I do it the night before. I put the grain bill in a bucket, just the whole grains not any flaked grain, take hand sprayer and wet it down, stirring the grain as I go trying to get it all wet.
I have found that this softens the husks a little and helps to keep the husk intact, but allow the kernel to crush. Keeping the husks mostly intact helps prevent the dreaded stuck sparge. If you don't condition, try it and see if you like it. I usually get 80-85% efficiency on my brews. I've not had a stuck sparge yet.
The other thing I did that seemed to help with milling was to run a motor to power the mill and get the driven roller speed in the 100-200 RPM range. A nice consistent speed gives me nice consistent results.