If I'm reading the OP correctly, he was measuring the same sample with two different hydrometers, so it doesn't sound like a topping off problem (my first thought until I reread it). I know my hydrometer likes to hang on the side of the tube and screw with the results, but if this has been a recurring problem that's not as likely. I know CO2 bubbles can lift a hydrometer after fermentation, so maybe bubbles of some sort if the wort got mixed up? Would think cold break would pull it down rather than lift it up.
What you might want to do is either find a third hydrometer/refractometer and compare it to your results. You could also take some sugar and dissolve it in some water to a known gravity, then measure it with both of your hydrometers and figure out which is correct.