The wort wasn't clear before I pitched the yeast. Should it have been?
I wouldn't worry about how clear the wort was when it went into primary. With everything floating around in it, it's damn near impossible (but not completely impossible) to have clear wort. But, given enough time, the heavier particles, including yeast, will settle out into the bottom of the fermenter.
I have a pale ale that's been in primary for almost two weeks now. I pulled a sample earlier today, to check on it's gravity... It's a bit lower than what Beer Smith pegged the FG at... I'll check on it again in a couple of more days to see where it's at. It was murky going into primary, but now it's really clear.
For lighter ales, 2-3 weeks in primary is a good start. Secondary if you really want to, but modern wisdom is to keep it in one vessel to allow the yeast to clean up after itself. Heavier beers could need more time in primary. I actually racked an old ale into secondary, to add some oak chips, as well as harvest the yeast, after a month in primary. I put the chips into a mesh bag, so that I can pull them out when it's time, and not need to rack again. I might leave it in secondary for another few weeks/month after the chips come out too. The secondary is a corny keg, so I'm not worried about things so much...
I'm planning on getting a couple of more corny's to use for either primary, or secondary, very soon. I really see why people like to use them now. I guess it's like riding a Harley... Unless you've been on one, you don't understand why people love them so much. Same thing with using corny's for fermenting (primary or secondary/aging)... I do see myself getting more (also) to use for aging my mead in bulk. So that will be at least one more 5 gallon and two more 3 gallon corny's right there...