I read the link and found it interesting, but it raised a couple of questions too. It seems that in this case the source of his infections were very likely caused by the grungy kettle valve. I don't think they mentioned if they did any follow up batches to confirm that the one good batch was not an outlier.
I wished they had shown how this particular ball valve was installed on the kettle. I found it curious that they said the valve barely got warm during the boil? Maybe it was piped so that the valve was physically separated from the kettle and it was not subjected to the same intense heat as the rest of the kettle?
On my electric boil kettle, the ball valve is mounted right on outlet of the kettle and I can't even touch my finger to it during the boil because it is intensely hot. If this persons valve really wasn't getting hot during the boil as he said, you might make the argument that the valve was not truly part of the hot side of the process. But that is just conjecture on my part since we didn't see what it looked like.
Still, of all the causal sources of beer infections among all home brewers out there, I have to suspect that boil kettle ball valves are a statistically insignificant source of infections.
I hope this was a permanent solution for this guys infections. Its always a good thing to understand your process and what/ how different things interact to affect your beer.
As a side note, part of my brew process is at the end of the boil, I run a half gallon or so of boiling hot wort through my CFC and tubing. I catch it in a pan and dump it back in the kettle and then repeat a second time. Only then do I turn on the cooling water and proceeding to run off into my fermenter.