I think I'm the person you're referring to, although, if I remember right, I mentioned that this was a personal idiosyncrasy, and didn't suggest it as an addition to any one else's brewing procedure.
Revvy and Riachabt are right: there's not much to see. And I agree that a plastic bottle would probably be better than a clear bottle, because you could feel the pressure increase. I don't often have plastic bottles on hand, though.
I find that a single clear bottle is useful for four reasons:
(1) When the beer is carbonating, I look for scum to develop at the top, as a sign of infection.
(2) If carbonation is proceeding properly then after a few days you can see dissolved CO2 bubbling up when you swirl the bottle.
(3) A clear bottle lets me see just how much sediment is present in the bottle. (Depending on the amount of sedimentation, I might not be comfortable giving bottles as gifts to friends.)
(4) The clear bottle is the last one I fill, and usually has a little too much headroom, a little too much sediment, etc. Keeping it in a bottle that's distinguishable from the other brown bottles helps me remember not to serve it to guests.
You can't do anything to improve a beer once it's in the bottles except wait. So observation really isn't necessary at all. If you want to forego a clear bottle (glass or plastic) you definitely should. But if you think there's any value to it, go for it.
As for "skunking" the clear bottle. . . brown bottles aren't completely light proof, so ALL of your bottles should be out of the sunlight while they're conditioning, if at all possible. If you're really concerned about the one clear bottle, throw it inside of the cylindrical packaging of a scotch bottle or something. Or in a towel. Or just tape a piece of paper around it. Light really shouldn't be a complicating issue.
EDIT: Not all "scum" rings at the top of the bottle are signs of infection. The yeast that's carbonating the bottles will often create a mini-krausen during the carbonation and conditioning process. That krausen should fall, and become bottle sediment. Some scum rings
are caused by bacteria, however. You get to recognize the difference after a couple of bad batches. (I had an infected tube for trio of wheatbeers.)