Well your process would be the list of the exact steps that you followed. I suspect that you still had a lot of yeast in suspension, hence the yeasty smell. It will drop out of suspension in the bottle, and that may help rid the cider of some of the yeasty aroma.
I typically ferment a cider in primary for 4 weeks. By then, a lot of the yeast has dropped out of suspension, and the cider is starting to clear. I would then transfer (rack) the cider to a secondary vessel (usually glass), in order to further clear and start to age. That step usually lasts another 4 weeks (for me). By the, the cider is very clear. That's when I will bottle.
As for fermentation, @buMbLeB has a good point. Are you sure that fermentation was complete prior to bottling? Did you take a gravity measurement at time of bottling? Did you prime the bottles with any sugar for carbonation?