Solving the mysteries of diastatic brewing yeast

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suregork

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So this is not super relevant to homebrewers, but I thought it might at least interest some of you. This is related to diastatic brewing yeast (i.e. the yeast formerly known as Saccharomyces diastaticus). About a year ago I set out to elucidate the reasons behind why some strains carrying the STA1 gene cause super-attenuation, while others are more benign. I'm now very excited to share our results! Below I’ll mention the main results.

First of all, here is a link to a pre-print (manuscript that has been submitted to a scientific journal for peer-review) with all the results: https://www.biorxiv.org/content/10.1101/654681v1


I’ve also summarized the paper in my blog for those interested (a bit more 'user friendly' text): http://beer.suregork.com/?p=4068


- The first main result is probably of most use to the brewing community. The variable diastatic ability in STA1+ strains is determined by a 1162 bp deletion in the STA1 promoter. Strains with the deletion are not very diastatic. You can use our newly designed PCR primers to differentiate between STA1+ strains with and without the deletion.

- The second result was that STA1 is not linked to wild yeast, rather it appears to be prevalent only in ‘Beer 2’/’Mosaic Beer’ strains, and surprisingly the ‘French Guiana, human’ strains. STA1 presumably gives a fitness advantage in starch-rich environments (e.g. beer).

- The third major result was that STA1 enables efficient maltotriose consumption in STA1+ strains. This appears to be the unknown mechanism that has enabled efficient maltotriose use in the ‘Beer 2’ strains (which otherwise have a non-functional AGT1/MAL11 transporter). STA1 therefore seems to be an alternative evolutionary route (‘domestication signature’) to enable efficient utilization of the sugars present in wort.

Let me know if you have any questions or feedback, I’d be happy to help!
 
Read he blog post the other day, really enjoyed it! Can’t believe no one thought to look at the promoters for a PCR test?! Do you know if the “standard” lab assay is endpoint or real-time based?
 
Read he blog post the other day, really enjoyed it! Can’t believe no one thought to look at the promoters for a PCR test?! Do you know if the “standard” lab assay is endpoint or real-time based?

Thanks! I believe the standard is to use end-point PCR, but I believe the more sophisticated systems use qPCR for improved detection limits.
 
Thanks! I believe the standard is to use end-point PCR, but I believe the more sophisticated systems use qPCR for improved detection limits.

Ah, that would explain the high degree of “false positive” STA1 designations then. Still mind boggling to not consider the promoter region, especially with end-point PCR.
 
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