I try to leave it out, methods I've used or considered:
(1) Using a hop bag during the boil, I usually do this but hear that it MAY affect hop utilization, alot of guys say they can't tell a difference, probably one of the best options, still going to have flameout/1 min hops to deal with though.
(2) After chilling, dumping your wort into your fermenter lined with a big (sanitized) strainer bag. Only works if you have a bucket, I did this last weekend with an APA and there was so much trub it clogged the bag and I know I didn't extract all of the wort that I could have. I don't think I would do it like this again.
(3) Siphoning out of the boil kettle with a strainer bag attached to the bottom of your racking cane/auto siphon. I will do this the next time I have a heavier hopped beer.
All in all, I don't know if you really need to leave it out anyways, my first beer I dumped it in and the beer came out bad BUT there were ALOT of other variables at play, I doubt the hops actually caused my off flavors. Some guys on here dont bother separating it and just dump it in.