This has started to eat at me too, already. I have one a week in bottles and I've started sampling it already! I put another in the fermenter, but until I finish the first lot, I have no bottles to put it in.
(Note: for the below, if you have project management software it might be more productive than a spreadsheet).
Being a geek as I am I took a spread sheet and made two columns labeled:
"Primary 1" ... "Bottles 1" ... "Beer in stock y/n"
Vertically the boxes are weeks. I then ran the pattern down the sheet with the following format:
2 weeks in primary, 3 weeks in bottles, 3 weeks drinking (optimistic!).
So the bottles are used for 6 weeks and the fermenter is idle for 4 weeks during a cycle. The full footprint cycle for the "line" is 6 weeks and the overlap (parallelization) is 2 weeks. The "no beer in stock" time is 3 weeks. (6 week footprint - 3 weeks drinking). It's MUCH easier to see on a spreadsheet (or tabbed out notepad text file).
It's obvious I need a second set of bottles first. It gets complicated to work out, easier with the spreadsheet.
Here is a PDF of what I mean:
http://www.campbell-multimedia.co.uk/temp/1forall.pdf