yep, just keep them in the dark. carboy's are clear too, and t-shirts are a great way to keep them dark/blocked from UV exposure. I find a men's size Medium works well.
i have some clear glass bottles...I like to use them for mead, since that tends to sit in a box in the dark for months on end to age.
Primary: English Mild
On tap: Pale Ale, Lancelot's Wheat, English Brown Ale, Steam Beer, HoovNuts IPA
Bottled: MOAM, Braggot, Raspberry Melomel, Merlot, Apfelwein, Pyment, Sweet mead, Cabernet
Gal in 2009: 27, Gal in 2010: 34, Gal in 2011: 13, Gal in 2012: 10